ZeissToSGI utility program converts from a Zeiss AxioVision TIFF file to one that can be read by the SoftWoRx software on SGI boxes. While Tagged Image File Format (TIFF) images are common, there can be many problems using TIFF files, especially created...

FCSExtract

FCSExtract 1.02

The purpose of the FCSExtract utility is to extract Flow Cytometry Standard (FCS) data from a binary FCS file and convert it to an ASCII text format, which can be read by a variety of software analysis packages. An example of working with this data in R...

FCSViewer

FCSViewer 2.0

The purpose of the FCSViewer program is to decompress a file with Zeiss Fluorescence Correlation Spectroscopy (FCS) data (in either ConfoCor 2 or ConfoCor 3 formats) and display the two channels. In addition, time "calipers" can be used to select and...

TweenMotif is an interactive Windows program for visualizing the locations of a specified target motif within a set of sequences as well as the gaps between the repeating motifs. The program creates a summary table of the frequency counts of the gap...

PeakFinder finds cohesin binding sites represented by the peaks in yeast chromatin immunoprecipitation (ChIP) microarray data, but can be applied to plot any measurement against a parameter such as genome coordinate, to interactively analyze the...