PySCeS

PySCeS is a project developed by the Triple-J Group for Molecular Cell Physiology in order to try model and understand the complex processes and systems which make up the living cell.

Features:

• A text based model description language.
• A structural analysis module.
• Integrators for time simulation
• Non-linear solvers for steady-state analysis
• A module for performing Metabolic Control Analysis
• A bifurcation module for systems which exhibit multiple steady states
• A variety of extra utilites for parameter scans, data output and plotting.
• A dynamic module loading framework.
• SBML import and export capability.

Requirements:

• Python
• SciPy
• NumPy