New Educational & Science Tools Scripts for Web

The Systems Biology Markup Language (SBML) is an XML-based description language for representing computational models in systems biology and bio-informatics.KEGG2SBML's capabilities are currently limited to converting only KEGG Metabolic Pathway files and...

Topographica is a software package for computational modeling of neural maps.The object is to help scientists understand brain functions at the level of the topographic maps that make up sensory and motor systems.Topographica is intended to complement the...

Graphs are mathematical objects consisting of vertices and edges connecting pairs of vertices: think of cities as vertices and interstates as edges connecting two cities. Algorithms might find a shortest path - the fastest route - or a minimal spanning...

Apache Hama is a toolkit for usage in mediums where large quantities of data need to be analyzed and processed.Hama specifically targets scientific mediums, being able to also interpret and execute basic or more advance mathematical operations, while also...

Artoo allows developers to control robots and various hardware devices via Ruby code.This basically enables developers to drop the complex machine code and use Ruby instead.Artoo not only works with Ruby, but also works with JRuby and Rubinius as well.The...

Apache cTAKES stands for Clinical Text Analysis and Knowledge Extraction System.This framework allows developers to analyze text for medical terms and pass the data for further processing to the according software.The Apache cTAKES system is closely...

It provides classes and functions for working with phylogenetic data such as trees and character matrices.It also supports reading and writing of the data in a range of standard phylogenetic data formats, such as NEXUS, NeXML, Phylip, NEWICK, FASTA,...

big.js is a stripped down version of bignumber.js, with lesser methods and in a smaller size for lighter projects.Just like the original, the library purely enhances JavaScript's built-in mathematical functions with features of the BigDecimal Java...

BioRuby provides an integrated environment for Bioinformatics (Biology Information science).Object oriented scripting language Ruby has many features suitable for bioinformatics research, for example, clear syntax to express complex objects, regular...

Gobot allows developers to write applications that control physical hardware via Google's Go language.Gobot supports common I/O drivers and a few major hardware platforms as well.This enables programmers to start writing their code and run it without any...