Must have Bioinformatics for Linux

Murka is a free, cross-platform and open source command-line software that helps users to easily solve the Phylogeny problem, simply by using Median Networks. It includes heuristic methods, exact algorithms, as well as a Steiner problem...

NEO (Neural Ensemble Objects) and is a project to provide a common set of base classes to be used in neural data analysis, with the aim of getting OpenElectrophy, NeuroTools and maybe other projects with similar goals more close together.Two major...

NetAtlas is a Cytoscape plugin that uses tissue gene expression data to filter cellular signaling network. NetAtlas identifies of tissue-defined networks, tissue-specific network components, and components with correlated expression across...

OpenElectrophy is a framework to facilitate manipulation, storage and analysis of electrophysiological data. It can import data from many different file formats and store them in a single SQL-type database.Analysis tools included in OpenELectrophy are...

Orange-Bioinformatics is an Orange data mining software package add-on. It extends Orange by providing common functionality for basic tasks in bioinformatics. It also provides widgets for Orange Canvas, which enable users who are not programmers to...

Orthanc is a completely free, open source, simple, lightweight, yet powerful RESTful standalone DICOM (Digital Imaging and Communications in Medicine) server that can be used in healthcare and medical research environments. It’s a command-line...

Pathomx (formerly MetaPath) is an open source graphical software implemented in IPython, Qt and PyQt, designed from the ground up to act as an interactive utility for the visualization and analysis of metabolic data under GNU/Linux and other...

PathVisio is an open source and completely free graphical application implemented in the Java programming language and designed from the ground up to be used for displaying, analyzing and editing biological pathways under a GNU/Linux operating system.Can...

PEAT is a suite of programs for capturing, predicting and analyzing biophysical characteristics of proteins.See http://enzyme.ucd.ie/PEAT for documentation, instructions, screenshots etc.Requirements:cursor-pointer" onclick="spovl3hide();"> System...

picme is a Python package that contains programs to estimate and plot phylogenetic informativeness for large datasets.InstallationFor the moment, the easiest way to install the program is:git clone git://github.com/faircloth-lab/picme.git /path/to/picmeTo...